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jlex
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//home/cluster1/data/bu01/1121861/jlex/alignment/alignments/.txt
>J99-L1-1/1-Red-NK ATGGAATCAGTAAAAACAGTAAAAACAAATAAAGTTGGCAAAAACACAGAGACAGCTAACACAGAGGCAAGTAAAGAGACTCATTTTAAACAAGCGAGTGCCATTACAAATACGCTCCGATCAATTGGTGGGATTTTTACAAAAATTGCAAAGAAAGTTAGAGAACTTGTGAAAAAACATCCCAAGAAAAGCAGTGTGGCATTAGTAGTATTGACCCATATTGCGTGCAAGAGGGCAAAAGAATTGGACGATAAAGTCCAAGATAAATCCAAACAAGCTGAAAAAGAAAATCAAATCAATTGGTGGAAATATTCAGGATTAACAATAGCGGCAAGTTTATTATTAGCCGCTTGTAGCACTGGTGATATTGATAAACAAATAGAACTA >J99-L2-1/1-Green-SN ATGCCTGTTATAAGAGTTTTAGTAATGCTTGCAACAATGATGATGAAATTAGTAAAAACGGCAAAAGAAAAGAAAGTTTTTAAGAATGTGGGAATATCTATAATGGGGATTGCTTTTTGGGAAGCGATAAAAGACTCGATAAAAAAACAAATTAAAAAAAGCGATTGGATATGCGGGAATGTTAAGACTGCGGATGATTATTTAAAAACGCATCCTAACTCATGGTTTAATTCAGCAATAGGTGTAACAGCGATAACAGCCATGCTTATGAATGTGTGTTTTGCTGATGACCAATCCAAAAAAGAAGTG