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/home/cluster1/data/bu01/1121861/jlex/rdloci/alignments/monkey_igrs.meg
#Mega Title: monkey_igrs.aln #26695_RD-Green_RD-Red_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------------------------GGCATAAG AAAATAAGAACACCATAAAATCGTTTTTAGCTTCTAGGAGACATCAGTCA GTTTCTTGCCATAGAAAAATCGCTTATTAGCTTGCTCCCTTTAAAAGGGT GTGAGTTTAAGGTA-TAAGGA--AAACTTGTATCAAGTTTTATTGGAATG ---GATTAGAAAAATCTGATTGGATTGACCCTTACAATTTTTCAAACCAA TCGTTTAATAGCGATTAAATATGRCTATATACACTACAACAATAAGATTT TGAAAGGTTGGTA------------------------------------- -------------------------------------------------- ------------ #26695_RD-Red_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -----------TGTTAATAAAGAAATAGAAGCAGTTGCTAATACTGAAAA GAAAGCAGAAAAAGCGGGTTATGGTTATAGTAAAAGGATGTAGGCATAAG AAAATAAGAACACCATAAAATCGTTTTTAGCTTCTAGGAGACATCAGTCA GTTTCTTGCCATAGAAAAATCGCTTATTAGCTTGCTCCCTTTAAAAGGGT GTGAGTTTAAGGTA-TAAGGA--AA-CTTGTATCAAGTTTTATTGGAATG ---GATTAGAAAAATCTGATTGGATTGACCCTTACAATTTTTCAAACCAA TCGTTTAATAGCGATTAAATATGACTATATACACTACAACAATAAGATTT TGAAAGGTTGGTA------------------------------------- -------------------------------------------------- ------------ #98-149_RD-Red_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------GCATAAG AAAA------CACCATAAAATCGTTCTTATGTTCTAGGAGACATCAATCA ATTTCTTGCCGTAGAAAAATCGCTTATTAGCTTGCTCCCTTTAAAAGGGT GTGAGTTTAAGGTA-TAAGGA--AAACTTGTATCAAGTTTTGTTGGAATG ---GATTAGAAAAATCTGATTGGATTGACCCTTACAATTTTTCAAACCAA TCGTTTAATAGCGATTAAATATGGCTATATATACTACAATAATAAGATTT TGATGGGTAAGATTGTTTTTTGAAAGGATTTAA----------------- -------------------------------------------------- ------------ #98-170_RD-Red_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------GCATAAG AAAA------CACCATAAAATCGTTCTTATGTTCTAGGAGACATCAATCA ATTTCTTGCCGTAGAAAAATCGCTTATTAGCTTGCTCCCTTTAAAAGGGT GTGAGTTTAAGGTA-TAAGGA--AAACTTGTATCAAGTTTTGTTGGAATG ---GATTAGAAAAATCTGATTGGATTGACCCTTACAATTTTTCAAACCAA TCGTTTAATAGCGATTAAATATGGCTATATATACTACAATAATAAGATTT TGATGGGTAAGATTGTTTTTTGAAAGGATTTAA----------------- -------------------------------------------------- ------------ #26695_RD-Red_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------GCATAAG AAAATAAGAACACCATAAAATCGTTTTTAGCTTCTAGGAGACATCAGTCA GTTTCTTGCCATAGAAAAATCGCTTATTAGCTTGCTCCCTTTAAAAGGGT GTGAGTTTAAGGTA-TAAGGA--AAACTTGTATCAAGTTTTATTGGAATG ---GATTAGAAAAATCTGATTGGATTGACCCTTACAATTTTTCAAACCAA TCGTTTAATAGCGATTAAATATGGCTATATATACTACAATAATAAGATTT TGAAAAGTGAGATTGTTTTTTGAAAGGATTTAA----------------- -------------------------------------------------- ------------ #98-147_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-170_non-RD_RD-Red_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCAGTGGAAACTAATAGCGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTATCAAGGGTTATTATCAACGCGCAGTTAAGGCCATGGTCTTTC AATTCTTTTTCTAACTGGCTACGGCGTCCAAGG----------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-149_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-150_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-151_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-169_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-170_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-171_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-182_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-208_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-210_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-212_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCA-TGGAAACTAATA-CGA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-180_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTT-----CAAAAAACAATCTTA----------CCTTTCAAAATTAT ATCAGTGGAAACTAATACGAA--AAAACCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #26695_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTYTT-----TAAMAAACAATCTTA----------CTTTWCAAAATYAT ATCA-TGGAAACTAATA-CGA--AAAATCCACTCAAGTTAGATTGATTTA -TTTATTA------------------------------------------ -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-9_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------TACCAACCT -TTTTTTTTTTCAAAAAACAATCTTA----------CCTATCAAAACTAT ATCAATGGAAACCAATACGAA--AAAATCCACTCAAGTTAGATCAACCCA GTTCATTATCAATGCGCAGTTAAGCCATGGTCTTTCAATTCTTTTCTAAT CGATAA-------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #26695_non-RD_RD-Red_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAAG-TT TTACCTTACTTTAGGGATAGC--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGCCAAATAA-CGCTACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTTGGTGCAATGTTTTTAACCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-169_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAAG-TT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-150_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAAG-TT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGC CCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-152_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAAGGTT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGC TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-151_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAAG-TT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGC TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-210_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAG--TT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-212_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAG--TT TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-149_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCCATTTGTAGT-TT TACCTTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-170_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------CCTCNATT-GTAG---T TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-171_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------------------CCCCATT-GTAG---T TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-182_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------GGGGTTACCCCATT-GTAG---T TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-147_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------CCCATT-GTAG---T TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-180_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------CCCATT-GTAG---T TTACCTTATTTTAGGGATAGT--TTAAG--------CTTTTAAATAAGGA TCTC-TTTTATTGTCAAATAA-CGCCACCATAAAAAATGT-TTTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAATCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-9_non-RD_RD-Red_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------------------------GGA GCAC-TTACCAAATAACGCCA-CACCACCATAAAAAACACATCTCAAAAG CCGACAGATAATTA-----AAAACTT-----AATGTTTTTAACCG----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-147_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------------------------------CTCT CT--TTTATAA-GAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-210_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------AGTCAGTGNGATCCGGTAAAAAGGAACTCT CTC-TTTATAA-GAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-180_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------CAAGTCAGTGAGATCCGGTAAAATGAAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-171_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------CAAGTCAGTG-GATCCCGTAAAAGGAAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-152_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --CTTTTATAA-GAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-18_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------AGCGGGATCCGTAAAGGAAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-170_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------CAAGTCAGTGGGATCC-GCAAAAAGAAACTCT CTC-TTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-208_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------AAGTCAGTGGGATCCGCT--AATGAAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-151_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------GAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-212_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------CCTAAGTCAGTGGGATACGACTAAAATGAACTCT CTCTTTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-149_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------GACGCTAATGAAACTCT CTC-TTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-169_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------------------GACGCTAATGAAACTCT CTC-TTTATAAAGAGAGAGGT--ATAAAAATCA---TTCTTCATAAAACA ACGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGAAGTTTAAAAAAGGTT CTGTTCTAATTGGGTAACATAGAGCCTTTAAAATACCATAAATAAGCTAA -AACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #26695_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -----------------------------GATCCGCTAAATTTAAAACCC CCTCTTTT--AAAAGAGGGAG--GTAAAAATCA---TTCTTCATAAAACG CCAC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATT------GGGATTCCTACTAAGGAGTTTAAAAAAGGCT CTGTTCTAACTGGGTAACATAGAGTTTTTAAAATACTATAAATAAGCTAA GAACGATTTTATGGTGTT------TTCTTATGC----------------- -------------------------------------------------- ------------ #98-150_non-RD_RD-Red_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------------AGACCCACTAAAATGAAAACCC TCTCTTTATAAAGAGAGGGAT--ATAAAAATCA---TTCTTCATGAAACA CCGCATAAAAATTGCAACCGC-TTGTATTTTGTAAAACGC---TCAAACG CTAA-AGACGATT------AGGATTCCTACTAAGGAGTTTAAAAAAGGCT CTGTTCTAATTGGGTAATATAGAGTCTTTAAAATACCATAAATAAGCTAA AAACGATTTTATGGTATTCTTATTTTCTTATGC----------------- -------------------------------------------------- ------------ #98-9_non-RD_RD-Green_2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------------------------------CTCC CTCTTTTA-AAAGAGGGAGG----TAAAAATCA---TTCTTGATAAACCA CCGC-TAAAAATTGCAACCGC-TTGTATTTTGTGAAACGC---TCAAACG CTAA-AGACGATTTT----ATGGTGTTTTCTTATGC-------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #26695_RD-Red_Post-RD_2 AATCTTTGTAAAAAACCCACCAACTGATCTGATTATATTTGTAATGGCAT TCGCTTGTTTAAAATGAGTCTCTTTATTTGCCTTTGCGTTASTGTCTCTG CGTTTTTGCCAACTTTATTTGTTTTTCCTGTTTTTACTGATTCCATTACC AACCTTTCAAAATCTTATTATTGTAGTATATATAGCCATATTTAATCGCT ATTAAACGATTGGTTTGAAAAATTGTAAGGGTCAATCCAATCAGATTTTT CTAATCCATTCCAACAAAACTTGATACAAGTTT---TCCTTATACCTTAA ACTCACACCCTTTTAAAGGGAATAATAAGTAATAACTCGCTAGCTAAACA TTCACTCTCTGCTTGAGTGTAAGCCTTTATCATTCCTTTTGACCTACCAA ATATTAGCATTTCTCTCAATCAAGCCTTGAGAAATTCAATTACACCCTTG TTTAACATCGCAAGCCTAGTAACTTAAAGCTCTTCTTTAGAGATTGGGCT AGATTGATCCTTATCCTTAATTCAAGCGCATGCACATTCATCTTTGTTAT CTTTGAATAAAC #98-9_RD-Green_non-RD_2 -------------------------------------------------- -------------------------------------------------- ------------------------TAAATCCTTTCAAAAAAACAAT--CC CACTCATCAAAATCTTATTTTTGTAGTATATATAGTCATATTTAATCGCT ATTAAACGATTGGTTTGAAAAATTGTGAGGGTCAATCCAATCAGATTTTT CTAATCCATTCCAATAAAACTTGATACAAGTTT---TCCTTATACCC-AA ACTCACACCCTTTTAAAGGGAATAATAGGCAATAACTCGCTAGCTAAACA TTCACTCTCTGCTTGAGTGTAAGCCTTT--CATTCCTTTTGACCTACCAA ATATTAGCATTTCTCTCAATCAAGCCTTGAGAAATTCAATTACACCCTTG TTTAACATCGCAAGCCTAGTAACTTAAAGCTCTTTTTTAGGGATTGGGTT AGATTGATCCTTATCCTTAATTCAAGTGCATG------------------ ------------ #98-152_RD-Red_non-RD_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------CTCTGTGTCNTGCCAACCTTATTTGT TTT-CCCGTTTTTACNGATCC-ATTACCACCTT---TTTTCAAAAAC--A ACCTACTTTCAAATAAACAGG----------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------ #98-208_non-RD_RD-Green_1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------